1. Home
  2. Species
  3. Amblovenatum opulentum
  4. Sequence
  5. Aop_g07073

Aop_g07073 (CAMTA3, SR1)


Aliases : CAMTA3, SR1

Description : CAMTA-type transcription factor & original description: none


Gene families : OG0000648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000648_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g07073
Cluster HCCA: Cluster_301

Target Alias Description ECC score Gene Family Method Actions
AT1G67310 No alias Calmodulin-binding transcription activator protein with... 0.02 OrthoFinder output from all 47 species
AT5G64220 No alias Calmodulin-binding transcription activator protein with... 0.04 OrthoFinder output from all 47 species
Adi_g085085 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08814 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g02392 No alias CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g07496 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010510001 No alias RNA biosynthesis.transcriptional activation.CAMTA... 0.03 OrthoFinder output from all 47 species
GSVIVT01017670001 CAMTA3, SR1 RNA biosynthesis.transcriptional activation.CAMTA... 0.02 OrthoFinder output from all 47 species
LOC_Os01g69910.1 LOC_Os01g69910 transcription factor (CAMTA) 0.02 OrthoFinder output from all 47 species
LOC_Os07g30774.1 LOC_Os07g30774 transcription factor (CAMTA) 0.03 OrthoFinder output from all 47 species
LOC_Os07g43030.1 CAMTA3, SR1,... transcription factor (CAMTA) 0.05 OrthoFinder output from all 47 species
Lfl_g12851 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
MA_10437014g0010 No alias Calmodulin-binding transcription activator 2... 0.02 OrthoFinder output from all 47 species
MA_16615g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_959704g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g08907 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19783 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010659 No alias CAMTA-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Sam_g07183 No alias CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo441667 CAMTA3, SR1 RNA biosynthesis.transcriptional activation.CAMTA... 0.03 OrthoFinder output from all 47 species
Solyc04g056270.4.1 CAMTA3, SR1,... transcription factor (CAMTA) 0.02 OrthoFinder output from all 47 species
Zm00001e002794_P002 CAMTA3, SR1,... transcription factor (CAMTA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004424 imidazoleglycerol-phosphate dehydratase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009306 protein secretion IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0035592 establishment of protein localization to extracellular region IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0071692 protein localization to extracellular region IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR005559 CG-1_dom 23 135
IPR002909 IPT_dom 570 656
IPR000048 IQ_motif_EF-hand-BS 1006 1024
IPR000048 IQ_motif_EF-hand-BS 982 1000
No external refs found!