Aliases : ATCPSF160, CPSF160
Description : component *(CPSF160/Yhh1) of Cleavage and Polyadenylation Specificity Factor (CPSF) complex & original description: none
Gene families : OG0003336 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003336_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G51660 | ATCPSF160, CPSF160 | cleavage and polyadenylation specificity factor 160 | 0.02 | OrthoFinder output from all 47 species | |
Als_g01205 | ATCPSF160, CPSF160 | component *(CPSF160/Yhh1) of Cleavage and... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.05G035200.1 | ATCPSF160,... | component *(CPSF160/Yhh1) of Cleavage and... | 0.03 | OrthoFinder output from all 47 species | |
Cre13.g573450 | ATCPSF160, CPSF160 | Probable cleavage and polyadenylation specificity factor... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01018506001 | ATCPSF160, CPSF160 | RNA processing.RNA 3-end polyadenylation.Cleavage and... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os04g18010.1 | ATCPSF160,... | component CPSF160/Yhh1 of Cleavage and Polyadenylation... | 0.03 | OrthoFinder output from all 47 species | |
Len_g23442 | ATCPSF160, CPSF160 | component *(CPSF160/Yhh1) of Cleavage and... | 0.03 | OrthoFinder output from all 47 species | |
MA_10435523g0020 | ATCPSF160, CPSF160 | Cleavage and polyadenylation specificity factor subunit... | 0.02 | OrthoFinder output from all 47 species | |
MA_9146756g0010 | ATCPSF160, CPSF160 | Cleavage and polyadenylation specificity factor subunit... | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g12582 | ATCPSF160, CPSF160 | component *(CPSF160/Yhh1) of Cleavage and... | 0.02 | OrthoFinder output from all 47 species | |
Ore_g06583 | ATCPSF160, CPSF160 | component *(CPSF160/Yhh1) of Cleavage and... | 0.04 | OrthoFinder output from all 47 species | |
Pnu_g11948 | ATCPSF160, CPSF160 | component *(CPSF160/Yhh1) of Cleavage and... | 0.03 | OrthoFinder output from all 47 species | |
Solyc03g007100.3.1 | ATCPSF160,... | component CPSF160/Yhh1 of Cleavage and Polyadenylation... | 0.04 | OrthoFinder output from all 47 species | |
Spa_g06166 | ATCPSF160, CPSF160 | component *(CPSF160/Yhh1) of Cleavage and... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e008515_P003 | ATCPSF160,... | component CPSF160/Yhh1 of Cleavage and Polyadenylation... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003678 | DNA helicase activity | IEP | HCCA |
MF | GO:0003697 | single-stranded DNA binding | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006354 | DNA-templated transcription elongation | IEP | HCCA |
BP | GO:0006368 | transcription elongation by RNA polymerase II | IEP | HCCA |
BP | GO:0006606 | protein import into nucleus | IEP | HCCA |
BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
CC | GO:0008023 | transcription elongation factor complex | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
BP | GO:0016570 | histone modification | IEP | HCCA |
CC | GO:0016593 | Cdc73/Paf1 complex | IEP | HCCA |
MF | GO:0016746 | acyltransferase activity | IEP | HCCA |
MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
BP | GO:0034504 | protein localization to nucleus | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
BP | GO:0051169 | nuclear transport | IEP | HCCA |
BP | GO:0051170 | import into nucleus | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:0140299 | small molecule sensor activity | IEP | HCCA |
MF | GO:0140612 | DNA damage sensor activity | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
MF | GO:0140664 | ATP-dependent DNA damage sensor activity | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
No external refs found! |