Aop_g06734


Description : not classified & original description: none


Gene families : OG0001517 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001517_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g06734

Target Alias Description ECC score Gene Family Method Actions
AT1G78170 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 OrthoFinder output from all 47 species
Ala_g20660 No alias regulatory protein *(CFL) of cutin and suberin... 0.06 OrthoFinder output from all 47 species
Ala_g23622 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01453 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g02339 No alias regulatory protein *(CFL) of cutin and suberin... 0.05 OrthoFinder output from all 47 species
Als_g04681 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene48908.t1 Aspi01Gene48908 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene50293.t1 Aspi01Gene50293 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dac_g15672 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_27782 No alias CFL cutin and suberin biosynthesis regulator 0.02 OrthoFinder output from all 47 species
Len_g29579 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g24922 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_22755g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g01750.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Nbi_g11303 No alias regulatory protein *(CFL) of cutin and suberin... 0.04 OrthoFinder output from all 47 species
Ore_g28548 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g02856 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ppi_g18018 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003730 No alias not classified & original description: CDS=19-150 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003742 No alias not classified & original description: CDS=3-662 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0168.g024257 No alias not classified & original description: CDS=381-929 0.02 OrthoFinder output from all 47 species
Sam_g19849 No alias regulatory protein *(CFL) of cutin and suberin... 0.03 OrthoFinder output from all 47 species
Sam_g39437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39438 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g01714 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e014649_P001 Zm00001e014649 CFL cutin and suberin biosynthesis regulator 0.02 OrthoFinder output from all 47 species
Zm00001e017869_P001 Zm00001e017869 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e039814_P001 Zm00001e039814 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA

No InterPro domains available for this sequence

No external refs found!