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  5. Aop_g06398

Aop_g06398 (EDA32)


Aliases : EDA32

Description : not classified & original description: none


Gene families : OG0000995 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000995_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g06398

Target Alias Description ECC score Gene Family Method Actions
AT5G09840 No alias Putative endonuclease or glycosyl hydrolase 0.03 OrthoFinder output from all 47 species
Ceric.21G012500.1 Ceric.21G012500 not classified & original description: pacid=50604148... 0.01 OrthoFinder output from all 47 species
Ehy_g09247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026616001 No alias No description available 0.03 OrthoFinder output from all 47 species
Pir_g20057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0072.g016939 No alias not classified & original description: CDS=1-1200 0.03 OrthoFinder output from all 47 species
Solyc11g005440.2.1 Solyc11g005440 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g13107 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004540 ribonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000966 RNA 5'-end processing IEP HCCA
BP GO:0001682 tRNA 5'-leader removal IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
CC GO:0030677 ribonuclease P complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0099116 tRNA 5'-end processing IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1902555 endoribonuclease complex IEP HCCA
CC GO:1905348 endonuclease complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR021139 NYN_MARF1 49 186
No external refs found!