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  5. Lfl_g09245

Lfl_g09245 (DegP7)


Aliases : DegP7

Description : protease *(Deg) & original description: none


Gene families : OG0002306 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002306_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g09245

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00147p00036340 DegP7,... Protein degradation.peptidase families.serine-type... 0.04 OrthoFinder output from all 47 species
Ceric.29G000400.1 DegP7, Ceric.29G000400 protease *(Deg) & original description: pacid=50625608... 0.02 OrthoFinder output from all 47 species
Gb_25532 DegP7 protease (Deg) 0.02 OrthoFinder output from all 47 species
Ore_g06256 DegP7 protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g091410.3.1 DegP7, Solyc02g091410 protease (Deg) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR041489 PDZ_6 317 369
IPR008915 Peptidase_M50 278 387
IPR025926 PDZ-like_dom 1000 1076
IPR025926 PDZ-like_dom 385 458
No external refs found!