Aop_g06288


Description : not classified & original description: none


Gene families : OG0002840 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002840_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g06288
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00104430 evm_27.TU.AmTr_v1... No description available 0.07 OrthoFinder output from all 47 species
AT4G24610 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.02 OrthoFinder output from all 47 species
AT5G48310 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.2 OrthoFinder output from all 47 species
Adi_g023654 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g27706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15201 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g46644 No alias not classified & original description: none 0.18 OrthoFinder output from all 47 species
Als_g48683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35489.t2 Aspi01Gene35489 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g009826 No alias not classified & original description: CDS=337-4263 0.08 OrthoFinder output from all 47 species
Ceric.14G053000.1 Ceric.14G053000 not classified & original description: pacid=50633866... 0.14 OrthoFinder output from all 47 species
Cre06.g278212 No alias No description available 0.05 OrthoFinder output from all 47 species
Dac_g13551 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g13433 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g13512 No alias not classified & original description: none 0.16 OrthoFinder output from all 47 species
GSVIVT01030144001 No alias No description available 0.23 OrthoFinder output from all 47 species
Gb_02174 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_04081 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os02g10490.1 LOC_Os02g10490 no hits & (original description: none) 0.18 OrthoFinder output from all 47 species
Len_g14723 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g37322 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Lfl_g39844 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
MA_10107198g0010 No alias no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
MA_1132025g0010 No alias no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
MA_134242g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_32509g0010 No alias no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
MA_7663039g0010 No alias no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Mp1g17040.1 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Nbi_g25115 No alias not classified & original description: none 0.26 OrthoFinder output from all 47 species
Ore_g30529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17841 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018471 No alias not classified & original description: CDS=256-3912 0.06 OrthoFinder output from all 47 species
Smo93144 No alias No description available 0.13 OrthoFinder output from all 47 species
Solyc04g076100.4.1 Solyc04g076100 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Solyc07g056060.4.1 Solyc07g056060 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Spa_g39806 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g13171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014046_P002 Zm00001e014046 no hits & (original description: none) 0.16 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!