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  5. Aop_g05131

Aop_g05131


Description : not classified & original description: none


Gene families : OG0000563 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000563_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g05131
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
Als_g06086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11820 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26397 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.12G043400.1 Ceric.12G043400 not classified & original description: pacid=50601666... 0.04 OrthoFinder output from all 47 species
Ceric.19G006800.1 Ceric.19G006800 not classified & original description: pacid=50575954... 0.05 OrthoFinder output from all 47 species
Cre07.g352650 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre17.g741850 No alias No description available 0.01 OrthoFinder output from all 47 species
MA_10600g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ore_g20723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16990 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 59 123
IPR000504 RRM_dom 181 248
No external refs found!