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  5. Aop_g05040

Aop_g05040 (SCRM2, ICE2)


Aliases : SCRM2, ICE2

Description : transcription factor *(ICE1/2) & original description: none


Gene families : OG0001330 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001330_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g05040

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00085090 evm_27.TU.AmTr_v1... Transcription factor SCREAM2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00016p00170610 ATICE1, ICE1,... External stimuli response.temperature.ICE-CBF cold... 0.05 OrthoFinder output from all 47 species
AMTR_s00184p00048850 bHLH093,... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Aspi01Gene03868.t2 SCRM2, ICE2,... transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66445.t1 ATICE1, ICE1,... transcription factor *(ICE1/2) & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0007.g010652 SCRM2, ICE2 bHLH-type transcription factor & original description: CDS=1-1947 0.04 OrthoFinder output from all 47 species
Azfi_s0560.g076949 SCRM2, ICE2 transcription factor *(ICE1/2) & original description:... 0.05 OrthoFinder output from all 47 species
Cba_g14843 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75218 SCRM2, ICE2 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.16G023800.1 SCRM2, ICE2,... transcription factor *(ICE1/2) & original description:... 0.06 OrthoFinder output from all 47 species
Ehy_g05926 ATICE1, ICE1, SCRM transcription factor *(ICE1/2) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17361 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01032998001 ATICE1, ICE1, SCRM External stimuli response.temperature.ICE-CBF cold... 0.04 OrthoFinder output from all 47 species
LOC_Os06g50900.1 bHLH093, LOC_Os06g50900 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Len_g04800 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
MA_448849g0010 ATICE1, ICE1, SCRM transcription factor (bHLH). transcription factor (ICE1|2) 0.07 OrthoFinder output from all 47 species
Msp_g13280 ATICE1, ICE1, SCRM transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08866 ATICE1, ICE1, SCRM transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001696 SCRM2, ICE2 bHLH-type transcription factor & original description: CDS=1-2049 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002409 SCRM2, ICE2 bHLH-type transcription factor & original description: CDS=1-732 0.02 OrthoFinder output from all 47 species
Sam_g12143 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g06696 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08227 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e021526_P001 ATICE1, ICE1,... transcription factor (bHLH). transcription factor (ICE1|2) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 474 516
No external refs found!