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  5. Lfl_g09097

Lfl_g09097 (RIK)


Aliases : RIK

Description : not classified & original description: none


Gene families : OG0003712 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003712_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g09097

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00154p00021020 RIK,... Protein RIK OS=Zea mays 0.03 OrthoFinder output from all 47 species
AT3G29390 RIK RS2-interacting KH protein 0.02 OrthoFinder output from all 47 species
Adi_g049731 RIK not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g059163 RIK not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g23032 RIK not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g32926 RIK not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g49526 RIK not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene70166.t1 RIK, Aspi01Gene70166 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene70170.t1 RIK, Aspi01Gene70170 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g78766 RIK not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G005800.1 RIK, Ceric.06G005800 not classified & original description: pacid=50620160... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020710.38 No alias Protein RIK OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre09.g389900 No alias Protein RIK OS=Zea mays 0.02 OrthoFinder output from all 47 species
Dcu_g48860 RIK not classified & original description: none 0.08 OrthoFinder output from all 47 species
GSVIVT01032902001 RIK Protein RIK OS=Zea mays 0.06 OrthoFinder output from all 47 species
Gb_05577 RIK Protein RIK OS=Zea mays (sp|q32sg5|rik_maize : 297.0) 0.05 OrthoFinder output from all 47 species
Len_g58691 RIK not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp7g05440.1 RIK Protein RIK OS=Zea mays (sp|q32sg5|rik_maize : 204.0) 0.02 OrthoFinder output from all 47 species
Nbi_g14046 RIK not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43004 RIK not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g04878 RIK not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g17978 RIK not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g20684 RIK not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e000840_P001 RIK, Zm00001e000840 Protein RIK OS=Zea mays (sp|q32sg5|rik_maize : 896.0) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!