Aop_g04739 (ftsh4)

Aliases : ftsh4

Description : ATP-dependent metalloprotease *(FtsH4/11) & original description: none

Gene families : OG0001340 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001340_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g04739

Target	Alias	Description	ECC score	Gene Family Method
Aev_g28301	ftsh4	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.02	OrthoFinder output from all 47 species
Ala_g04225	ftsh4	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.03	OrthoFinder output from all 47 species
Aob_g06707	ftsh4	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.02	OrthoFinder output from all 47 species
Ceric.08G016800.1	ftsh4, Ceric.08G016800	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.03	OrthoFinder output from all 47 species
Ceric.09G038500.1	ftsh4, Ceric.09G038500	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.03	OrthoFinder output from all 47 species
Cre14.g625625	FTSH11	Protein degradation.peptidase families.metallopeptidase...	0.02	OrthoFinder output from all 47 species
Dac_g09586	ftsh4	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01035393001	ftsh4	Protein degradation.peptidase families.metallopeptidase...	0.02	OrthoFinder output from all 47 species
LOC_Os01g39250.1	ftsh4, LOC_Os01g39250	component FtsH4\|11 of FtsH mitochondrial protease complexes	0.02	OrthoFinder output from all 47 species
Lfl_g10762	ftsh4	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.02	OrthoFinder output from all 47 species
Mp7g18210.1	FTSH11	component FtsH4\|11 of FtsH mitochondrial protease complexes	0.02	OrthoFinder output from all 47 species
Pir_g15560	ftsh4	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004176	ATP-dependent peptidase activity	IEA	Interproscan
MF	GO:0004222	metalloendopeptidase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006508	proteolysis	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008237	metallopeptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0004066	asparagine synthase (glutamine-hydrolyzing) activity	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
BP	GO:0006528	asparagine metabolic process	IEP	HCCA
BP	GO:0006529	asparagine biosynthetic process	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
BP	GO:0008652	amino acid biosynthetic process	IEP	HCCA
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	HCCA
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	HCCA
BP	GO:0009966	regulation of signal transduction	IEP	HCCA
BP	GO:0009967	positive regulation of signal transduction	IEP	HCCA
BP	GO:0010646	regulation of cell communication	IEP	HCCA
BP	GO:0010647	positive regulation of cell communication	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	HCCA
BP	GO:0023051	regulation of signaling	IEP	HCCA
BP	GO:0023056	positive regulation of signaling	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0048518	positive regulation of biological process	IEP	HCCA
BP	GO:0048522	positive regulation of cellular process	IEP	HCCA
BP	GO:0048583	regulation of response to stimulus	IEP	HCCA
BP	GO:0048584	positive regulation of response to stimulus	IEP	HCCA
BP	GO:0080134	regulation of response to stress	IEP	HCCA
BP	GO:0080135	regulation of cellular response to stress	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEP	HCCA
BP	GO:1901605	alpha-amino acid metabolic process	IEP	HCCA
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	HCCA
BP	GO:2000638	regulation of SREBP signaling pathway	IEP	HCCA
BP	GO:2000640	positive regulation of SREBP signaling pathway	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	260	389
IPR041569	AAA_lid_3	412	455
IPR000642	Peptidase_M41	471	651

External Links

No external refs found!

Aop_g04739 (ftsh4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation