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  5. Aop_g04570

Aop_g04570 (LPA1)


Aliases : LPA1

Description : protein involved in PS-II assembly *(LPA1) & original description: none


Gene families : OG0007503 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007503_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g04570
Cluster HCCA: Cluster_322

Target Alias Description ECC score Gene Family Method Actions
Aev_g09161 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.03 OrthoFinder output from all 47 species
Cre10.g430150 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
GSVIVT01027972001 LPA1 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
Gb_01636 LPA1 LPA1 protein involved in PS-II assembly 0.04 OrthoFinder output from all 47 species
Len_g00549 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.05 OrthoFinder output from all 47 species
MA_8804338g0010 LPA1 Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.04 OrthoFinder output from all 47 species
Msp_g09572 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.03 OrthoFinder output from all 47 species
Pir_g10734 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g33137 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.04 OrthoFinder output from all 47 species
Spa_g09685 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR021883 LPA1-like 179 255
No external refs found!