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  5. Aop_g04483

Aop_g04483


Description : not classified & original description: none


Gene families : OG0000712 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000712_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g04483

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00072820 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G29350 No alias Kinase-related protein of unknown function (DUF1296) 0.02 OrthoFinder output from all 47 species
Adi_g021462 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02771 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene04421.t1 Aspi01Gene04421 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001273 No alias not classified & original description: CDS=173-2680 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g007708 No alias not classified & original description: CDS=120-2903 0.03 OrthoFinder output from all 47 species
Cba_g15326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G033400.1 Ceric.02G033400 not classified & original description: pacid=50584302... 0.03 OrthoFinder output from all 47 species
Dac_g07091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09171 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g16552 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19052 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04008 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_30926 No alias GBF-interacting protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os09g08670.1 LOC_Os09g08670 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g03459 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g11160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15622 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10908 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18048 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0233.g026486 No alias not classified & original description: CDS=154-2919 0.03 OrthoFinder output from all 47 species
Sam_g10558 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50960 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo438753 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc02g071180.3.1 Solyc02g071180 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc05g018750.4.1 Solyc05g018750 GBF-interacting protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g08817 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g02140 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e020237_P001 Zm00001e020237 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e026550_P001 Zm00001e026550 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
MF GO:0140612 DNA damage sensor activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140664 ATP-dependent DNA damage sensor activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR009719 GIP1_N 19 76
No external refs found!