Aop_g04431 (ATATH6, ATH6)

Aliases : ATATH6, ATH6

Description : subfamily ABCA transporter & original description: none

Gene families : OG0001879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001879_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g04431

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00078p00139590	ATH16, ATATH16,...	ABC transporter A family member 12 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AT3G47740	ATATH2, ATH2, ABCA3	ABC2 homolog 2	0.02	OrthoFinder output from all 47 species
AT3G47750	ABCA4, ATATH3	ATP binding cassette subfamily A4	0.02	OrthoFinder output from all 47 species
AT3G47770	ATH5, ATATH5, ABCA6	ABC2 homolog 5	0.02	OrthoFinder output from all 47 species
AT3G47780	ATATH6, ATH6	ABC2 homolog 6	0.03	OrthoFinder output from all 47 species
AT5G61700	ATH16, ATATH16	ABC2 homolog 16	0.02	OrthoFinder output from all 47 species
Aev_g01577	ATATH6, ATH6	subfamily ABCA transporter & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0022.g016229	ATATH6, ATH6	subfamily ABCA transporter & original description: CDS=234-3275	0.03	OrthoFinder output from all 47 species
Ceric.18G061500.1	ATATH6, ATH6,...	subfamily ABCA transporter & original description:...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000057.67	ATATH4, ABCA5, ATH4	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
Cre14.g618400	ATH7, ATATH7	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
Cre17.g721000	ATH7, ATATH7	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
GSVIVT01008040001	ATATH6, ATH6	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
LOC_Os08g30770.1	ATATH6, ATH6,...	subfamily ABCA transporter	0.02	OrthoFinder output from all 47 species
Lfl_g05675	ATATH6, ATH6	subfamily ABCA transporter & original description: none	0.03	OrthoFinder output from all 47 species
Mp5g00540.1	ATH7, ATATH7	subfamily ABCA transporter	0.03	OrthoFinder output from all 47 species
Mp7g18420.1	ATH7, ATATH7	subfamily ABCA transporter	0.04	OrthoFinder output from all 47 species
Msp_g11278	ATATH6, ATH6	subfamily ABCA transporter & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g08039	ATATH6, ATH6	subfamily ABCA transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g10749	ATATH6, ATH6	subfamily ABCA transporter & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g16539	No alias	subfamily ABCA transporter & original description: none	0.02	OrthoFinder output from all 47 species
Smo171117	ATATH6, ATH6	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Smo268954	ATATH6, ATH6	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Solyc03g113040.4.1	ATATH6, ATH6,...	subfamily ABCA transporter	0.03	OrthoFinder output from all 47 species
Solyc06g070920.3.1	ATATH6, ATH6,...	subfamily ABCA transporter	0.02	OrthoFinder output from all 47 species
Spa_g02656	ATATH6, ATH6	subfamily ABCA transporter & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g31576	ATATH6, ATH6	subfamily ABCA transporter & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e014489_P004	ATATH14, ATH14,...	subfamily ABCA transporter	0.02	OrthoFinder output from all 47 species
Zm00001e022343_P002	ATATH6, ATH6,...	subfamily ABCA transporter	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004252	serine-type endopeptidase activity	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006465	signal peptide processing	IEP	HCCA
BP	GO:0016485	protein processing	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
BP	GO:0051604	protein maturation	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	660	804

External Links

No external refs found!

Aop_g04431 (ATATH6, ATH6)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation