1. Home
  2. Species
  3. Amblovenatum opulentum
  4. Sequence
  5. Aop_g03832

Aop_g03832


Description : EC_3.2 glycosylase & original description: none


Gene families : OG0001022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001022_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g03832
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Ehy_g10191 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009003001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01013328001 XYL4, ATBXL4 Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 OrthoFinder output from all 47 species
GSVIVT01017658001 BXL3, BX3, XYL3,... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.05 OrthoFinder output from all 47 species
GSVIVT01017659001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.05 OrthoFinder output from all 47 species
LOC_Os01g19220.1 ATBXL2, BXL2,... bifunctional alpha-L-arabinofuranosidase and... 0.03 OrthoFinder output from all 47 species
LOC_Os04g54810.1 XYL4, ATBXL4,... bifunctional alpha-L-arabinofuranosidase and... 0.04 OrthoFinder output from all 47 species
MA_4577g0010 XYL4, ATBXL4 bifunctional alpha-L-arabinofuranosidase and... 0.03 OrthoFinder output from all 47 species
Mp5g15680.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.02 OrthoFinder output from all 47 species
Msp_g10167 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g19793 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10735 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g079570.3.1 ATBXL2, BXL2,... bifunctional alpha-L-arabinofuranosidase and... 0.03 OrthoFinder output from all 47 species
Tin_g08893 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e007432_P001 Zm00001e007432 bifunctional alpha-L-arabinofuranosidase and... 0.03 OrthoFinder output from all 47 species
Zm00001e024309_P001 Zm00001e024309 bifunctional alpha-L-arabinofuranosidase and... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004559 alpha-mannosidase activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR002772 Glyco_hydro_3_C 397 633
IPR001764 Glyco_hydro_3_N 107 351
No external refs found!