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  5. Aop_g03798

Aop_g03798


Description : EC_3.2 glycosylase & original description: none


Gene families : OG0000312 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000312_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g03798

Target Alias Description ECC score Gene Family Method Actions
AT3G06770 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G42950 No alias Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g110576 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07714 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g13749 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g18890 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29798 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69423.t1 Aspi01Gene69423 EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g12302 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16676 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G023500.1 Ceric.09G023500 EC_3.2 glycosylase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.38G048100.1 Ceric.38G048100 EC_3.2 glycosylase & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g02823 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07611 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08388 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10127 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015044001 No alias Probable polygalacturonase OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
GSVIVT01028246001 No alias Probable polygalacturonase OS=Vitis vinifera 0.02 OrthoFinder output from all 47 species
Gb_23151 No alias Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
Gb_23153 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
Gb_39001 No alias Probable polygalacturonase OS=Vitis vinifera... 0.04 OrthoFinder output from all 47 species
LOC_Os02g15690.1 LOC_Os02g15690 Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
LOC_Os03g61800.2 LOC_Os03g61800 Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
LOC_Os12g36810.1 LOC_Os12g36810 Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
Lfl_g38310 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Mp7g13870.1 No alias Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
Msp_g06926 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g12579 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31187 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06175 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g40127 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g18897 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g32745 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g10961 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g13459 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25453 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g117750.3.1 Solyc03g117750 Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
Solyc09g075460.3.1 Solyc09g075460 Probable polygalacturonase OS=Vitis vinifera... 0.05 OrthoFinder output from all 47 species
Spa_g39268 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006249_P001 Zm00001e006249 Probable polygalacturonase OS=Vitis vinifera... 0.04 OrthoFinder output from all 47 species
Zm00001e039674_P002 Zm00001e039674 Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 178 458
No external refs found!