Description : component *(uL22) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0001495 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001495_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Aop_g03684 | |
Cluster | HCCA: Cluster_13 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00007p00159640 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00013p00224030 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
AT1G27400 | No alias | Ribosomal protein L22p/L17e family protein | 0.03 | OrthoFinder output from all 47 species | |
AT1G67430 | No alias | Ribosomal protein L22p/L17e family protein | 0.02 | OrthoFinder output from all 47 species | |
Ceric.02G040500.1 | Ceric.02G040500 | component *(uL22) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00001215.8 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
Cre13.g568900 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os09g08430.1 | LOC_Os09g08430 | component RPL17 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g31086 | No alias | component *(uL22) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Mp1g10230.1 | No alias | component RPL17 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g15381 | No alias | component *(uL22) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g00835 | No alias | component *(uL22) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Sam_g15137 | No alias | component *(uL22) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e003661_P001 | Zm00001e003661 | component RPL17 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004611 | phosphoenolpyruvate carboxykinase activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
BP | GO:0006099 | tricarboxylic acid cycle | IEP | HCCA |
MF | GO:0008964 | phosphoenolpyruvate carboxylase activity | IEP | HCCA |
BP | GO:0015977 | carbon fixation | IEP | HCCA |
MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0022900 | electron transport chain | IEP | HCCA |
BP | GO:0022904 | respiratory electron transport chain | IEP | HCCA |
BP | GO:0030001 | metal ion transport | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0044183 | protein folding chaperone | IEP | HCCA |
MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
MF | GO:0140662 | ATP-dependent protein folding chaperone | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001063 | Ribosomal_L22 | 17 | 152 |
No external refs found! |