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  5. Aop_g03471

Aop_g03471 (EIF4A-2)


Aliases : EIF4A-2

Description : mRNA unwinding factor *(eIF4A)) & original description: none


Gene families : OG0000532 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000532_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g03471

Target Alias Description ECC score Gene Family Method Actions
AT1G51380 No alias DEA(D/H)-box RNA helicase family protein 0.05 OrthoFinder output from all 47 species
AT1G72730 No alias DEA(D/H)-box RNA helicase family protein 0.04 OrthoFinder output from all 47 species
AT3G13920 TIF4A1, EIF4A1, RH4 eukaryotic translation initiation factor 4A1 0.02 OrthoFinder output from all 47 species
Adi_g087856 EIF4A-III not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g114925 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05564 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07823 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g71080 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g75441 EIF4A-2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.21G079100.1 EIF4A-2, Ceric.21G079100 mRNA unwinding factor *(eIF4A)) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g10266 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g04331 EIF4A-III helicase component *(eIF4A3) of RNA quality control Exon... 0.04 OrthoFinder output from all 47 species
Ehy_g09077 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01035374001 EIF4A-2 Protein biosynthesis.translation initiation.mRNA... 0.02 OrthoFinder output from all 47 species
LOC_Os06g48750.2 EIF4A-2, LOC_Os06g48750 mRNA unwinding factor (eIF4A) 0.02 OrthoFinder output from all 47 species
Mp2g02760.1 EIF4A-2 mRNA unwinding factor (eIF4A) 0.04 OrthoFinder output from all 47 species
Mp4g09540.1 EIF4A-III helicase component eIF4A3 of RNA quality control Exon... 0.02 OrthoFinder output from all 47 species
Ore_g10223 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14903 EIF4A-III helicase component *(eIF4A3) of RNA quality control Exon... 0.02 OrthoFinder output from all 47 species
Pir_g20207 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c21_9040V3.1 EIF4A-III, Pp3c21_9040 eukaryotic initiation factor 4A-III 0.01 OrthoFinder output from all 47 species
Pp3c6_1080V3.1 EIF4A-2, Pp3c6_1080 eukaryotic translation initiation factor 4A1 0.01 OrthoFinder output from all 47 species
Ppi_g03000 EIF4A-III helicase component *(eIF4A3) of RNA quality control Exon... 0.03 OrthoFinder output from all 47 species
Ppi_g15917 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g10962 No alias mRNA unwinding factor *(eIF4A)) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g23496 No alias mRNA unwinding factor *(eIF4A)) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35004 No alias mRNA unwinding factor *(eIF4A)) & original description: none 0.03 OrthoFinder output from all 47 species
Smo143895 EIF4A-2 Protein biosynthesis.translation initiation.mRNA... 0.02 OrthoFinder output from all 47 species
Solyc08g062800.3.1 EIF4A-2, Solyc08g062800 mRNA unwinding factor (eIF4A) 0.03 OrthoFinder output from all 47 species
Solyc11g033280.2.1 EIF4A-III, Solyc11g033280 helicase component eIF4A3 of RNA quality control Exon... 0.03 OrthoFinder output from all 47 species
Tin_g03932 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05567 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e013648_P002 EIF4A-2, Zm00001e013648 mRNA unwinding factor (eIF4A) 0.03 OrthoFinder output from all 47 species
Zm00001e016284_P001 EIF4A-III, Zm00001e016284 helicase component eIF4A3 of RNA quality control Exon... 0.04 OrthoFinder output from all 47 species
Zm00001e030233_P004 EIF4A-2, Zm00001e030233 mRNA unwinding factor (eIF4A) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 262 370
IPR011545 DEAD/DEAH_box_helicase_dom 61 222
No external refs found!