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  5. Aop_g03070

Aop_g03070


Description : E3 ubiquitin ligase & original description: none


Gene families : OG0000370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g03070
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Sam_g22715 No alias E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g08341 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g12426 No alias E3 ubiquiTin ligase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000045 autophagosome assembly IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007033 vacuole organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:1905037 autophagosome organization IEP HCCA
InterPro domains Description Start Stop
IPR022143 DUF3675 72 184
IPR011016 Znf_RING-CH 20 65
No external refs found!