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  5. Aop_g02235

Aop_g02235


Description : ubiquitin-binding adaptor *(UFD3) & original description: none


Gene families : OG0004990 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004990_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g02235

Target Alias Description ECC score Gene Family Method Actions
Cre09.g389912 No alias Dynein assembly factor with WDR repeat domains 1... 0.01 OrthoFinder output from all 47 species
GSVIVT01031913001 No alias Dynein assembly factor with WDR repeat domains 1... 0.05 OrthoFinder output from all 47 species
LOC_Os07g03160.1 LOC_Os07g03160 ubiquitin-binding adaptor (UFD3) 0.02 OrthoFinder output from all 47 species
Msp_g36601 No alias ubiquitin-binding adaptor *(UFD3) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g51840 No alias ubiquitin-binding adaptor *(UFD3) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e032747_P004 Zm00001e032747 ubiquitin-binding adaptor (UFD3) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR013535 PUL_dom 492 754
IPR015155 PFU 338 446
IPR001680 WD40_repeat 100 135
IPR001680 WD40_repeat 14 44
IPR001680 WD40_repeat 138 175
IPR001680 WD40_repeat 260 291
IPR001680 WD40_repeat 178 214
IPR001680 WD40_repeat 219 254
No external refs found!