Aop_g02207 (FUC1, ATFUC1)

Aliases : FUC1, ATFUC1

Description : EC_3.2 glycosylase & original description: none

Gene families : OG0002142 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002142_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g02207

Target	Alias	Description	ECC score	Gene Family Method
MA_10432635g0010	FUC1, ATFUC1	Putative alpha-L-fucosidase 1 OS=Oryza sativa subsp....	0.03	OrthoFinder output from all 47 species
MA_171759g0010	FUC1, ATFUC1	Alpha-L-fucosidase 1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Nbi_g13272	FUC1, ATFUC1	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g04732	No alias	EC_3.2 glycosylase & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004560	alpha-L-fucosidase activity	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0015928	fucosidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006302	double-strand break repair	IEP	HCCA
BP	GO:0006310	DNA recombination	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000421	FA58C	361	464
IPR000933	Glyco_hydro_29	79	341

External Links

No external refs found!