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  5. Aop_g01648

Aop_g01648 (mMDH1)


Aliases : mMDH1

Description : peroxisomal NAD-dependent malate dehydrogenase & original description: none


Gene families : OG0000664 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000664_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g01648
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00133930 mMDH1,... Cellular respiration.tricarboxylic acid... 0.04 OrthoFinder output from all 47 species
Ala_g03999 MDH malate dehydrogenase component of AAA-ATPase motor... 0.03 OrthoFinder output from all 47 species
Ala_g37775 mMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.03 OrthoFinder output from all 47 species
Cba_g15037 mMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.03 OrthoFinder output from all 47 species
Ceric.28G059400.1 MDH, Ceric.28G059400 malate dehydrogenase component of AAA-ATPase motor... 0.03 OrthoFinder output from all 47 species
Dcu_g03735 mMDH1 mitochondrial NAD-dependent malate dehydrogenase &... 0.03 OrthoFinder output from all 47 species
Len_g09181 MDH malate dehydrogenase component of AAA-ATPase motor... 0.03 OrthoFinder output from all 47 species
Len_g13390 mMDH1 mitochondrial NAD-dependent malate dehydrogenase &... 0.03 OrthoFinder output from all 47 species
Nbi_g04197 mMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.05 OrthoFinder output from all 47 species
Ore_g03139 mMDH2 mitochondrial NAD-dependent malate dehydrogenase &... 0.03 OrthoFinder output from all 47 species
Pir_g04686 mMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.05 OrthoFinder output from all 47 species
Pp3c17_6520V3.1 MDH, Pp3c17_6520 malate dehydrogenase 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015485 mMDH1 mitochondrial NAD-dependent malate dehydrogenase &... 0.03 OrthoFinder output from all 47 species
Sam_g24048 No alias malate dehydrogenase component of AAA-ATPase motor... 0.03 OrthoFinder output from all 47 species
Sam_g51178 No alias malate dehydrogenase component of AAA-ATPase motor... 0.02 OrthoFinder output from all 47 species
Smo133026 MDH Malate dehydrogenase, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Spa_g09592 mMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.07 OrthoFinder output from all 47 species
Spa_g11260 MDH malate dehydrogenase component of AAA-ATPase motor... 0.06 OrthoFinder output from all 47 species
Spa_g52195 mMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.14 OrthoFinder output from all 47 species
Spa_g53075 MDH not classified & original description: none 0.13 OrthoFinder output from all 47 species
Tin_g00660 mMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.1 OrthoFinder output from all 47 species
Tin_g03287 MDH malate dehydrogenase component of AAA-ATPase motor... 0.04 OrthoFinder output from all 47 species
Zm00001e026586_P002 mMDH1, Zm00001e026586 Malate dehydrogenase 2, mitochondrial OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
CC GO:0005840 ribosome IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001236 Lactate/malate_DH_N 20 162
IPR022383 Lactate/malate_DH_C 164 327
No external refs found!