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  5. Lfl_g08716

Lfl_g08716 (MEE44)


Aliases : MEE44

Description : not classified & original description: none


Gene families : OG0004619 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004619_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g08716

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00100050 MEE44,... No description available 0.04 OrthoFinder output from all 47 species
AT4G00060 MEE44 Nucleotidyltransferase family protein 0.07 OrthoFinder output from all 47 species
Adi_g010448 MEE44 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g39058 MEE44 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19743 MEE44 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06425 MEE44 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene14169.t1 MEE44, Aspi01Gene14169 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0015.g013806 MEE44 not classified & original description: CDS=19-5049 0.03 OrthoFinder output from all 47 species
Ceric.11G072500.1 MEE44, Ceric.11G072500 not classified & original description: pacid=50595400... 0.1 OrthoFinder output from all 47 species
Ehy_g19434 MEE44 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018154001 MEE44 No description available 0.11 OrthoFinder output from all 47 species
Gb_00149 MEE44 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g45800.1 MEE44, LOC_Os06g45800 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_9969507g0010 MEE44 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g23120.1 MEE44 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g19686 MEE44 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002874 MEE44 not classified & original description: CDS=772-5031 0.04 OrthoFinder output from all 47 species
Sam_g26689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g090860.3.1 MEE44, Solyc01g090860 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Zm00001e030357_P002 MEE44, Zm00001e030357 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016779 nucleotidyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006476 protein deacetylation IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016575 histone deacetylation IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0035601 protein deacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0098732 macromolecule deacylation IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002934 Polymerase_NTP_transf_dom 1297 1340
IPR002058 PAP_assoc 1519 1572
No external refs found!