Aliases : PRPL11
Description : component *(uL11c) of large plastid ribosomal-subunit proteome & original description: none
Gene families : OG0007074 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007074_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Aop_g01017 | |
Cluster | HCCA: Cluster_322 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00001p00272010 | PRPL11,... | Protein biosynthesis.organelle translation... | 0.02 | OrthoFinder output from all 47 species | |
AT1G32990 | PRPL11 | plastid ribosomal protein l11 | 0.06 | OrthoFinder output from all 47 species | |
Aev_g24656 | PRPL11 | component *(uL11c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
Ala_g12058 | PRPL11 | component *(uL11c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
Als_g00538 | PRPL11 | component *(uL11c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Aob_g13607 | PRPL11 | component *(uL11c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0591.g078746 | PRPL11 | component *(uL11c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.03G039700.1 | PRPL11, Ceric.03G039700 | component *(uL11c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Cre10.g423650 | PRPL11 | Protein biosynthesis.organelle translation... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01019689001 | PRPL11 | Protein biosynthesis.organelle translation... | 0.06 | OrthoFinder output from all 47 species | |
Gb_12514 | PRPL11 | component psRPL11 of large ribosomal subunit proteome | 0.08 | OrthoFinder output from all 47 species | |
LOC_Os03g03020.1 | PRPL11, LOC_Os03g03020 | component psRPL11 of large ribosomal subunit proteome | 0.06 | OrthoFinder output from all 47 species | |
Len_g25437 | PRPL11 | component *(uL11c) of large plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
Lfl_g13039 | PRPL11 | component *(uL11c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
MA_368887g0010 | PRPL11 | 50S ribosomal protein L11, chloroplastic OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Mp7g12110.1 | PRPL11 | component psRPL11 of large ribosomal subunit proteome | 0.12 | OrthoFinder output from all 47 species | |
Nbi_g11504 | PRPL11 | component *(uL11c) of large plastid ribosomal-subunit... | 0.11 | OrthoFinder output from all 47 species | |
Pir_g17849 | PRPL11 | component *(uL11c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Pp3c10_12450V3.1 | PRPL11, Pp3c10_12450 | plastid ribosomal protein l11 | 0.01 | OrthoFinder output from all 47 species | |
Pp3c12_19370V3.1 | PRPL11, Pp3c12_19370 | plastid ribosomal protein l11 | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g00505 | PRPL11 | component *(uL11c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0122.g021434 | PRPL11 | component *(uL11c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
Sam_g06585 | No alias | component *(uL11c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Solyc08g083350.4.1 | PRPL11, Solyc08g083350 | component psRPL11 of large ribosomal subunit proteome | 0.04 | OrthoFinder output from all 47 species | |
Spa_g16220 | PRPL11 | component *(uL11c) of large plastid ribosomal-subunit... | 0.1 | OrthoFinder output from all 47 species | |
Tin_g17431 | PRPL11 | component *(uL11c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e000163_P001 | PRPL11, Zm00001e000163 | component psRPL11 of large ribosomal subunit proteome | 0.06 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004751 | ribose-5-phosphate isomerase activity | IEP | HCCA |
MF | GO:0004853 | uroporphyrinogen decarboxylase activity | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | HCCA |
BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | HCCA |
MF | GO:0008883 | glutamyl-tRNA reductase activity | IEP | HCCA |
BP | GO:0009052 | pentose-phosphate shunt, non-oxidative branch | IEP | HCCA |
CC | GO:0009521 | photosystem | IEP | HCCA |
CC | GO:0009523 | photosystem II | IEP | HCCA |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
BP | GO:0010206 | photosystem II repair | IEP | HCCA |
BP | GO:0010207 | photosystem II assembly | IEP | HCCA |
BP | GO:0015979 | photosynthesis | IEP | HCCA |
MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | HCCA |
MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
MF | GO:0016853 | isomerase activity | IEP | HCCA |
MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | HCCA |
MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | HCCA |
MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
BP | GO:0030091 | protein repair | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
BP | GO:0036211 | protein modification process | IEP | HCCA |
BP | GO:0043412 | macromolecule modification | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
MF | GO:0050661 | NADP binding | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
CC | GO:0098796 | membrane protein complex | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
No external refs found! |