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  5. Aop_g00639

Aop_g00639


Description : not classified & original description: none


Gene families : OG0001243 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001243_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g00639

Target Alias Description ECC score Gene Family Method Actions
AT5G65180 No alias ENTH/VHS family protein 0.03 OrthoFinder output from all 47 species
Adi_g011661 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g36074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.34G011700.1 Ceric.34G011700 not classified & original description: pacid=50623631... 0.02 OrthoFinder output from all 47 species
Gb_26035 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os04g54420.1 LOC_Os04g54420 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g03570.1 LOC_Os11g03570 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g03340.1 LOC_Os12g03340 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10437244g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_12916g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp6g09520.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g02341 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g17600 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g094360.3.1 Solyc02g094360 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc11g012740.2.1 Solyc11g012740 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g12605 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006808_P002 Zm00001e006808 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006569 CID_dom 9 118
No external refs found!