Aop_g00324


Description : not classified & original description: none


Gene families : OG0001666 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001666_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g00324
Cluster HCCA: Cluster_303

Target Alias Description ECC score Gene Family Method Actions
AT1G44770 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009113 No alias not classified & original description: CDS=292-1281 0.03 OrthoFinder output from all 47 species
Cba_g09713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_00979 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g02739 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g00700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010728 No alias not classified & original description: CDS=1-774 0.03 OrthoFinder output from all 47 species
Sam_g14646 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g10172 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g23687 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g39377 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009254 peptidoglycan turnover IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0030203 glycosaminoglycan metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!