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  5. Aop_g00271

Aop_g00271


Description : rRNA processing factor *(IRP1) & original description: none


Gene families : OG0002038 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002038_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g00271
Cluster HCCA: Cluster_279

Target Alias Description ECC score Gene Family Method Actions
Ehy_g08221 No alias rRNA processing factor *(IRP1) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g006320.4.1 Solyc05g006320 rRNA processing factor (IRP1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
CC GO:0044599 AP-5 adaptor complex IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001660 SAM 190 243
No external refs found!