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  5. Aop_g00133

Aop_g00133


Description : histone H3 variant *(CENH3) & original description: none


Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g00133

Target Alias Description ECC score Gene Family Method Actions
Aev_g11605 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04281 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11657 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01931.t1 Aspi01Gene01931 histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0109.g045300 No alias histone H3 variant *(CENH3) & original description: CDS=340-828 0.03 OrthoFinder output from all 47 species
Ceric.14G051000.1 Ceric.14G051000 histone *(H3) & original description: pacid=50634481... 0.02 OrthoFinder output from all 47 species
Cre16.g661450 No alias Cell cycle.mitosis and meiosis.chromosome... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 40 156
No external refs found!