Lfl_g08396 (SRO1)


Aliases : SRO1

Description : organellar-signalling mediator *(RCD1) & original description: none


Gene families : OG0001605 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0001605_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g08396
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
Dcu_g22889 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.01 OrthoFinder output from all 39 species
Pnu_g06687 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.01 OrthoFinder output from all 39 species
Pnu_g25860 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.01 OrthoFinder output from all 39 species
Ppi_g01011 AtRCD1, RCD1,... not classified & original description: none 0.01 OrthoFinder output from all 39 species
Sacu_v1.1_s0056.g014563 SRO1 organellar-signalling mediator *(RCD1) & original... 0.01 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
InterPro domains Description Start Stop
IPR012317 Poly(ADP-ribose)pol_cat_dom 280 377
IPR004170 WWE-dom 93 148
IPR022003 RST 491 552
No external refs found!