Lfl_g08396 (SRO1)


Aliases : SRO1

Description : organellar-signalling mediator *(RCD1) & original description: none


Gene families : OG0000733 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000733_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g08396
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00122750 AtRCD1, RCD1,... Inactive poly [ADP-ribose] polymerase RCD1... 0.02 OrthoFinder output from all 47 species
AT1G70440 SRO3 similar to RCD one 3 0.02 OrthoFinder output from all 47 species
Adi_g051301 SRO1 organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
Ala_g04667 SRO1 organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g01256 SRO1 organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
InterPro domains Description Start Stop
IPR012317 Poly(ADP-ribose)pol_cat_dom 280 377
IPR004170 WWE-dom 93 148
IPR022003 RST 491 552
No external refs found!