Lfl_g07858


Description : not classified & original description: none


Gene families : OG0003935 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003935_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g07858

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00254550 evm_27.TU.AmTr_v1... COP1-interactive protein 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT1G24460 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.06 OrthoFinder output from all 47 species
AT4G31570 No alias CONTAINS InterPro DOMAIN/s: Prefoldin... 0.05 OrthoFinder output from all 47 species
Adi_g011988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g30321 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g14350 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g22595 No alias vesicle trafficking tethering factor *(TNO1) & original... 0.05 OrthoFinder output from all 47 species
Ceric.15G031700.1 Ceric.15G031700 not classified & original description: pacid=50639891... 0.06 OrthoFinder output from all 47 species
Dcu_g08332 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g01716 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01033178001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
GSVIVT01033179001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
LOC_Os02g38480.1 LOC_Os02g38480 TNO1 vesicle trafficking tethering factor 0.03 OrthoFinder output from all 47 species
Len_g22993 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10430492g0030 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10431592g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10432450g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_167448g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp4g21920.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g25758 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g37299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022514 No alias not classified & original description: CDS=346-8904 0.05 OrthoFinder output from all 47 species
Sam_g17495 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g014200.3.1 Solyc05g014200 TNO1 vesicle trafficking tethering factor 0.08 OrthoFinder output from all 47 species
Solyc08g006420.3.1 Solyc08g006420 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e013662_P003 Zm00001e013662 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e015026_P001 Zm00001e015026 TNO1 vesicle trafficking tethering factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015293 symporter activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!