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Aliases : CRR22
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00250660 | OTP84,... | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00053p00090700 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g13880... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00067p00084250 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g27110... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g004506 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g005606 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g033689 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g036743 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g066083 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g067822 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g084267 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g108176 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g44730 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g04857 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g16619 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g17512 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g24332 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g36208 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g37181 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Als_g06720 | OTP82 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g05974 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g06731 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g29683 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g07902 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g14476 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g23671 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g23950 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g68030 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene71957.t1 | EMB2261, Aspi01Gene71957 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g06196 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g15277 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g22397 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g28001 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g29692 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g30008 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g77187 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.18G049100.1 | Ceric.18G049100 | not classified & original description: pacid=50621467... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g13728 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g18424 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g35075 | REME1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g42748 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08431 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g08525 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g13294 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g24574 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g26930 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g66160.1 | REME1, LOC_Os01g66160 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g54500 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06165 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g14946 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g21470 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g03152 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g15041 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g08923 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g41642 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g34957 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g46650 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g04533 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g19854 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g30572 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g14613 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g45358 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0004.g002062 | No alias | not classified & original description: CDS=1-1716 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0006.g003060 | No alias | not classified & original description: CDS=1-2058 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0021.g008324 | SNX1, ATSNX1 | regulatory factor SNX1 of Retromer protein recycling... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0147.g023175 | No alias | not classified & original description: CDS=1-2640 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g17989 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo111894 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | OrthoFinder output from all 47 species | |
| Smo92610 | No alias | Pentatricopeptide repeat-containing protein At5g56310... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g005170.3.1 | Solyc07g005170 | Pentatricopeptide repeat-containing protein At1g09410,... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g25363 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g23111 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000272 | polysaccharide catabolic process | IEP | HCCA |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0008037 | cell recognition | IEP | HCCA |
| BP | GO:0009056 | catabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
| MF | GO:0016160 | amylase activity | IEP | HCCA |
| MF | GO:0016161 | beta-amylase activity | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| BP | GO:0048544 | recognition of pollen | IEP | HCCA |
| BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR046848 | E_motif | 590 | 648 |
| IPR002885 | Pentatricopeptide_repeat | 448 | 469 |
| IPR002885 | Pentatricopeptide_repeat | 245 | 270 |
| IPR002885 | Pentatricopeptide_repeat | 273 | 292 |
| IPR002885 | Pentatricopeptide_repeat | 68 | 115 |
| IPR002885 | Pentatricopeptide_repeat | 170 | 217 |
| IPR002885 | Pentatricopeptide_repeat | 371 | 413 |
| IPR002885 | Pentatricopeptide_repeat | 472 | 519 |
| No external refs found! |