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  5. Lfl_g06728

Lfl_g06728


Description : not classified & original description: none


Gene families : OG0005967 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005967_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g06728
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Aev_g01555 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g01078 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g07385 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g39665 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g05044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g20786 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp1g07710.1 No alias Pentatricopeptide repeat-containing protein At4g30825,... 0.02 OrthoFinder output from all 47 species
Ppi_g09709 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13761 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g25071 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g52939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 290 317
IPR002885 Pentatricopeptide_repeat 535 559
IPR002885 Pentatricopeptide_repeat 257 285
IPR002885 Pentatricopeptide_repeat 639 662
IPR002885 Pentatricopeptide_repeat 365 389
IPR002885 Pentatricopeptide_repeat 572 597
IPR002885 Pentatricopeptide_repeat 677 704
IPR002885 Pentatricopeptide_repeat 745 770
IPR002885 Pentatricopeptide_repeat 325 354
IPR002885 Pentatricopeptide_repeat 803 861
IPR002885 Pentatricopeptide_repeat 392 438
IPR002885 Pentatricopeptide_repeat 885 928
No external refs found!