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  5. Lfl_g06478

Lfl_g06478 (TGD2)


Aliases : TGD2

Description : substrate binding component *(TGD2) of TGD lipid importer complex & original description: none


Gene families : OG0002728 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002728_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g06478

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00204440 TGD2,... Lipid metabolism.lipid transport.plastidial lipid... 0.02 OrthoFinder output from all 47 species
Ceric.21G037400.1 TGD2, Ceric.21G037400 substrate binding component *(TGD2) of TGD lipid... 0.03 OrthoFinder output from all 47 species
Mp6g18390.1 TGD2 substrate binding component TGD2 of TGD lipid importer complex 0.04 OrthoFinder output from all 47 species
Sam_g26374 No alias substrate binding component *(TGD2) of TGD lipid... 0.03 OrthoFinder output from all 47 species
Solyc02g082030.3.1 TGD2, Solyc02g082030 substrate binding component TGD2 of TGD lipid importer complex 0.03 OrthoFinder output from all 47 species
Spa_g00751 TGD2 substrate binding component *(TGD2) of TGD lipid... 0.05 OrthoFinder output from all 47 species
Zm00001e018496_P001 TGD2, Zm00001e018496 substrate binding component TGD2 of TGD lipid importer complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003399 Mce/MlaD 129 203
No external refs found!