Lfl_g06189 (EMB1956, Hsp88.1,...)

Aliases : EMB1956, Hsp88.1, HSP90.5, AtHsp90.5, CR88

Description : chaperone *(Hsp90) & original description: none

Gene families : OG0000167 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000167_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g06189

Target	Alias	Description	ECC score	Gene Family Method
Azfi_s0073.g037087	EMB1956,...	chaperone *(Hsp90) & original description: CDS=173-2464	0.03	OrthoFinder output from all 47 species
Ceric.27G012500.1	EMB1956,...	chaperone *(Hsp90) & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g01022	EMB1956,...	chaperone *(Hsp90) & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g13039	EMB1956,...	chaperone *(Hsp90) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g06194	EMB1956,...	chaperone *(Hsp90) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g11580	EMB1956,...	chaperone *(Hsp90) & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os08g38086.3	EMB1956,...	chaperone (Hsp90)	0.02	OrthoFinder output from all 47 species
Len_g19155	EMB1956,...	chaperone *(Hsp90) & original description: none	0.03	OrthoFinder output from all 47 species
MA_10861g0010	HSP81-1, HSP83,...	chaperone (Hsp90)	0.02	OrthoFinder output from all 47 species
Sam_g06703	No alias	chaperone *(Hsp90) & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006457	protein folding	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0044183	protein folding chaperone	None	Extended
MF	GO:0051082	unfolded protein binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:0140662	ATP-dependent protein folding chaperone	IEA	Interproscan
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004386	helicase activity	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003594	HATPase_C	158	319
IPR001404	Hsp90_fam	323	815

External Links

No external refs found!

Lfl_g06189 (EMB1956, Hsp88.1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation