Aliases : AtRABA1f, RABA1f
Description : A-class RAB GTPase & original description: none
Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00021p00189630 | AtRABA1f,... | Vesicle trafficking.regulation of membrane tethering and... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00068p00145200 | ATRABA2A,... | Vesicle trafficking.regulation of membrane tethering and... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00130p00044920 | ATHSGBP, RABA1d,... | Vesicle trafficking.regulation of membrane tethering and... | 0.02 | OrthoFinder output from all 47 species | |
Adi_g015797 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g04605 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g31350 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g09205 | ATRABA2A,... | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g42193 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0005.g008909 | ATRABA5C, ARA4,... | A-class RAB GTPase & original description: CDS=226-924 | 0.05 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020961.97 | AtRABA1e, RABA1e | Vesicle trafficking.regulation of membrane tethering and... | 0.01 | OrthoFinder output from all 47 species | |
Dcu_g10466 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os05g20050.1 | RAB-A2C,... | A-class RAB GTPase | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os05g44070.1 | ATRABA1B, RAB11,... | A-class RAB GTPase | 0.02 | OrthoFinder output from all 47 species | |
Len_g03672 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Mp3g00730.1 | ATRABA5C, ARA4,... | A-class RAB GTPase | 0.02 | OrthoFinder output from all 47 species | |
Ore_g27361 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g20558 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g08711 | ATRABA5C, ARA4,... | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0026.g009470 | ATRABA2A,... | A-class RAB GTPase & original description: CDS=131-796 | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0028.g009913 | AtRABA1f, RABA1f | not classified & original description: CDS=1-477 | 0.04 | OrthoFinder output from all 47 species | |
Spa_g07579 | AtRABA5a, RABA5a | A-class RAB GTPase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g09793 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e009602_P001 | ATRABA2A,... | A-class RAB GTPase | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003924 | GTPase activity | IEA | Interproscan |
MF | GO:0005525 | GTP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000145 | exocyst | IEP | HCCA |
MF | GO:0000976 | transcription cis-regulatory region binding | IEP | HCCA |
MF | GO:0000977 | RNA polymerase II transcription regulatory region sequence-specific DNA binding | IEP | HCCA |
MF | GO:0001067 | transcription regulatory region nucleic acid binding | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
MF | GO:0004590 | orotidine-5'-phosphate decarboxylase activity | IEP | HCCA |
MF | GO:0005516 | calmodulin binding | IEP | HCCA |
MF | GO:0005543 | phospholipid binding | IEP | HCCA |
MF | GO:0005546 | phosphatidylinositol-4,5-bisphosphate binding | IEP | HCCA |
BP | GO:0006072 | glycerol-3-phosphate metabolic process | IEP | HCCA |
BP | GO:0006206 | pyrimidine nucleobase metabolic process | IEP | HCCA |
BP | GO:0006207 | 'de novo' pyrimidine nucleobase biosynthetic process | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006835 | dicarboxylic acid transport | IEP | HCCA |
BP | GO:0006887 | exocytosis | IEP | HCCA |
MF | GO:0008289 | lipid binding | IEP | HCCA |
BP | GO:0009112 | nucleobase metabolic process | IEP | HCCA |
BP | GO:0015711 | organic anion transport | IEP | HCCA |
BP | GO:0015740 | C4-dicarboxylate transport | IEP | HCCA |
BP | GO:0015743 | malate transport | IEP | HCCA |
BP | GO:0015849 | organic acid transport | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
BP | GO:0019856 | pyrimidine nucleobase biosynthetic process | IEP | HCCA |
MF | GO:0032422 | purine-rich negative regulatory element binding | IEP | HCCA |
BP | GO:0032940 | secretion by cell | IEP | HCCA |
MF | GO:0035091 | phosphatidylinositol binding | IEP | HCCA |
MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
BP | GO:0046112 | nucleobase biosynthetic process | IEP | HCCA |
BP | GO:0046168 | glycerol-3-phosphate catabolic process | IEP | HCCA |
BP | GO:0046434 | organophosphate catabolic process | IEP | HCCA |
BP | GO:0046903 | secretion | IEP | HCCA |
BP | GO:0046942 | carboxylic acid transport | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
MF | GO:0051287 | NAD binding | IEP | HCCA |
BP | GO:0052646 | alditol phosphate metabolic process | IEP | HCCA |
BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | HCCA |
BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | HCCA |
CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
BP | GO:0140352 | export from cell | IEP | HCCA |
BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | HCCA |
MF | GO:1901981 | phosphatidylinositol phosphate binding | IEP | HCCA |
MF | GO:1902936 | phosphatidylinositol bisphosphate binding | IEP | HCCA |
MF | GO:1990837 | sequence-specific double-stranded DNA binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001806 | Small_GTPase | 14 | 174 |
No external refs found! |