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  5. Lfl_g05754

Lfl_g05754 (SPK1)


Aliases : SPK1

Description : RopGEF guanine nucleotide exchange factor *(SPIKE) & original description: none


Gene families : OG0004216 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004216_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g05754
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
AT4G16340 SPK1 guanyl-nucleotide exchange factors;GTPase binding;GTP binding 0.03 OrthoFinder output from all 47 species
Ceric.09G010400.1 SPK1, Ceric.09G010400 RopGEF guanine nucleotide exchange factor *(SPIKE) &... 0.04 OrthoFinder output from all 47 species
Zm00001e038257_P006 SPK1, Zm00001e038257 DHR2-type RopGEF guanine nucleotide exchange factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003855 3-dehydroquinate dehydratase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR046770 DOCKER_Lobe_B 1602 1684
IPR046769 DOCKER_Lobe_A 1381 1534
IPR027007 C2_DOCK-type_domain 468 636
IPR046773 DOCKER_Lobe_C 1731 1828
No external refs found!