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  5. Lfl_g05692

Lfl_g05692 (RPN1A, ATRPN1A)


Aliases : RPN1A, ATRPN1A

Description : regulatory component *(RPN1) of 26S proteasome & original description: none


Gene families : OG0003700 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003700_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g05692

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00242820 RPN1A, ATRPN1A,... Protein degradation.26S proteasome.regulatory... 0.06 OrthoFinder output from all 47 species
AT2G20580 RPN1A, ATRPN1A 26S proteasome regulatory subunit S2 1A 0.03 OrthoFinder output from all 47 species
Adi_g022425 RPN1A, ATRPN1A regulatory component *(RPN1) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Adi_g055914 RPN1A, ATRPN1A regulatory component *(RPN1) of 26S proteasome &... 0.07 OrthoFinder output from all 47 species
Aev_g10435 RPN1A, ATRPN1A regulatory component *(RPN1) of 26S proteasome &... 0.06 OrthoFinder output from all 47 species
Als_g23720 RPN1A, ATRPN1A regulatory component *(RPN1) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Aob_g03547 RPN1A, ATRPN1A regulatory component *(RPN1) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Cba_g59194 RPN1A, ATRPN1A regulatory component *(RPN1) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020703.10 RPN1A, ATRPN1A Protein degradation.26S proteasome.regulatory... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020703.9 No alias 26S proteasome non-ATPase regulatory subunit 2 homolog A... 0.02 OrthoFinder output from all 47 species
Cre16.g676197 RPN1B, ATRPN1B Protein degradation.26S proteasome.regulatory... 0.07 OrthoFinder output from all 47 species
Dac_g15343 RPN1A, ATRPN1A regulatory component *(RPN1) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Dcu_g06470 RPN1A, ATRPN1A regulatory component *(RPN1) of 26S proteasome &... 0.07 OrthoFinder output from all 47 species
Dde_g02349 RPN1A, ATRPN1A regulatory component *(RPN1) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
GSVIVT01020602001 RPN1A, ATRPN1A Protein degradation.26S proteasome.regulatory... 0.05 OrthoFinder output from all 47 species
Gb_05383 RPN1A, ATRPN1A regulatory component RPN1 of 26S proteasome 0.03 OrthoFinder output from all 47 species
LOC_Os02g05340.1 RPN1A, ATRPN1A,... regulatory component RPN1 of 26S proteasome 0.07 OrthoFinder output from all 47 species
LOC_Os09g15750.1 RPN1A, ATRPN1A,... regulatory component RPN1 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Len_g01899 RPN1A, ATRPN1A regulatory component *(RPN1) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
MA_42234g0010 RPN1A, ATRPN1A 26S proteasome non-ATPase regulatory subunit 2 homolog A... 0.03 OrthoFinder output from all 47 species
Mp5g07110.1 RPN1A, ATRPN1A regulatory component RPN1 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Solyc07g053650.4.1 RPN1A, ATRPN1A,... regulatory component RPN1 of 26S proteasome 0.1 OrthoFinder output from all 47 species
Spa_g10515 RPN1A, ATRPN1A regulatory component *(RPN1) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Spa_g49868 RPN1A, ATRPN1A regulatory component *(RPN1) of 26S proteasome &... 0.06 OrthoFinder output from all 47 species
Tin_g10608 RPN1A, ATRPN1A regulatory component *(RPN1) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Zm00001e013651_P001 RPN1A, ATRPN1A,... regulatory component RPN1 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Zm00001e025223_P001 RPN1A, ATRPN1A,... regulatory component RPN1 of 26S proteasome 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR040892 RPN1_N 51 353
IPR041433 RPN1_C 835 888
No external refs found!