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  5. Lfl_g05616

Lfl_g05616


Description : not classified & original description: none


Gene families : OG0000738 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000738_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g05616

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00242920 evm_27.TU.AmTr_v1... Uncharacterized protein At5g41620 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Als_g43721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01027031001 No alias Uncharacterized protein At5g41620 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os02g15980.1 LOC_Os02g15980 Uncharacterized protein At5g41620 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os04g53350.1 LOC_Os04g53350 Uncharacterized protein At5g41620 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os06g31190.1 LOC_Os06g31190 Uncharacterized protein At5g41620 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os08g09170.1 LOC_Os08g09170 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp3g08580.1 No alias Uncharacterized protein At5g41620 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e019582_P001 Zm00001e019582 Uncharacterized protein At5g41620 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e030712_P001 Zm00001e030712 Uncharacterized protein At5g41620 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003855 3-dehydroquinate dehydratase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!