Lfl_g05606


Description : not classified & original description: none


Gene families : OG0001104 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001104_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g05606

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00187020 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g01390... 0.02 OrthoFinder output from all 47 species
Aev_g07294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g12238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g14119 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g14389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18254 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09139 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G061400.1 Ceric.01G061400 not classified & original description: pacid=50592672... 0.03 OrthoFinder output from all 47 species
Ceric.03G036200.1 Ceric.03G036200 not classified & original description: pacid=50571952... 0.03 OrthoFinder output from all 47 species
Ceric.19G017900.1 Ceric.19G017900 not classified & original description: pacid=50576444... 0.04 OrthoFinder output from all 47 species
Ceric.26G072600.1 EMB2750, Ceric.26G072600 not classified & original description: pacid=50599096... 0.03 OrthoFinder output from all 47 species
Ceric.39G058300.1 Ceric.39G058300 not classified & original description: pacid=50582561... 0.06 OrthoFinder output from all 47 species
Dac_g22799 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01019029001 No alias Pentatricopeptide repeat-containing protein At2g01390... 0.04 OrthoFinder output from all 47 species
GSVIVT01019040001 No alias Pentatricopeptide repeat-containing protein At5g66631... 0.02 OrthoFinder output from all 47 species
Gb_32462 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.03 OrthoFinder output from all 47 species
Gb_36347 No alias Pentatricopeptide repeat-containing protein At5g66631... 0.03 OrthoFinder output from all 47 species
Len_g17138 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_132279g0010 No alias Pentatricopeptide repeat-containing protein At5g02860... 0.03 OrthoFinder output from all 47 species
MA_89328g0010 No alias Pentatricopeptide repeat-containing protein At5g66631... 0.03 OrthoFinder output from all 47 species
Mp5g07730.1 No alias Pentatricopeptide repeat-containing protein At1g09900... 0.02 OrthoFinder output from all 47 species
Pir_g09735 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g59517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08931 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17969 CRM3, HCF152 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32274 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010895 No alias not classified & original description: CDS=1-2118 0.03 OrthoFinder output from all 47 species
Sam_g10479 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12526 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25243 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g065510.1.1 Solyc02g065510 Pentatricopeptide repeat-containing protein At5g66631... 0.02 OrthoFinder output from all 47 species
Spa_g09030 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g11567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 284 331
IPR002885 Pentatricopeptide_repeat 215 261
IPR033443 PPR_long 559 697
No external refs found!