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  5. Lfl_g05491

Lfl_g05491


Description : subfamily ABCG transporter & original description: none


Gene families : OG0005321 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005321_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g05491

Target Alias Description ECC score Gene Family Method Actions
Adi_g051871 No alias subfamily ABCG transporter & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g11842 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g24507 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000789.12 No alias ABC transporter G family member 7 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021537.72 D3, CER5,... ABC transporter G family member 7 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g01707 No alias subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01011781001 No alias Solute transport.primary active transport.ABC... 0.09 OrthoFinder output from all 47 species
LOC_Os01g03144.1 LOC_Os01g03144 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Mp3g18640.1 No alias subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Nbi_g06753 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15552 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g008350.3.1 Solyc05g008350 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Spa_g15739 No alias subfamily ABCG transporter & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051179 localization IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR043926 ABCG_dom 260 325
IPR003439 ABC_transporter-like_ATP-bd 78 230
IPR013525 ABC_2_trans 382 592
No external refs found!