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  5. Lfl_g05468

Lfl_g05468 (IMPA-1, IMPA1,...)


Aliases : IMPA-1, IMPA1, AT-IMP, ATKAP ALPHA, AIMP ALPHA

Description : nucleocytoplasmic transport cargo adaptor protein *(IMP-alpha) & original description: none


Gene families : OG0000665 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000665_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g05468

Target Alias Description ECC score Gene Family Method Actions
Adi_g025667 IMPA-4 nucleocytoplasmic transport cargo adaptor protein... 0.03 OrthoFinder output from all 47 species
Ala_g02068 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.03 OrthoFinder output from all 47 species
Dac_g01608 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.03 OrthoFinder output from all 47 species
Dde_g02882 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.04 OrthoFinder output from all 47 species
Nbi_g03793 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.03 OrthoFinder output from all 47 species
Zm00001e025581_P001 IMPA-1, IMPA1,... importin alpha adaptor proteins 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0019867 outer membrane IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR032413 Arm_3 454 501
IPR002652 Importin-a_IBB 12 91
IPR000225 Armadillo 146 184
IPR000225 Armadillo 187 228
IPR000225 Armadillo 313 354
IPR000225 Armadillo 272 310
IPR000225 Armadillo 400 437
IPR000225 Armadillo 356 395
IPR000225 Armadillo 103 143
IPR000225 Armadillo 242 268
No external refs found!