1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g05452

Lfl_g05452 (AKINBETA1)


Aliases : AKINBETA1

Description : regulatory subunit beta of SnRK1 kinase complex & original description: none


Gene families : OG0000948 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000948_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g05452

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00043530 evm_27.TU.AmTr_v1... Multi-process regulation.SnRK1 metabolic regulator... 0.03 OrthoFinder output from all 47 species
Adi_g116993 AKINBETA1 regulatory subunit beta of SnRK1 kinase complex &... 0.03 OrthoFinder output from all 47 species
Aop_g20230 AKINBETA1 regulatory subunit beta of SnRK1 kinase complex &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene55062.t1 Aspi01Gene55062 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g03166 AKINBETA1 regulatory subunit beta of SnRK1 kinase complex &... 0.02 OrthoFinder output from all 47 species
Ehy_g00892 AKINBETA1 regulatory subunit beta of SnRK1 kinase complex &... 0.03 OrthoFinder output from all 47 species
LOC_Os03g20340.1 AKINBETA1, LOC_Os03g20340 regulatory subunit beta of SNF1-related SnRK1 kinase... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0147.g023135 AKINBETA1 regulatory subunit beta of SnRK1 kinase complex &... 0.03 OrthoFinder output from all 47 species
Sam_g28924 No alias regulatory subunit beta of SnRK1 kinase complex &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR032640 AMPK1_CBM 125 205
IPR006828 ASC_dom 238 308
No external refs found!