Aliases : WTF1, AtWTF1
Description : plastidial RNA basal splicing factor *(WTF1) & original description: none
Gene families : OG0001240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001240_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Lfl_g05402 | |
Cluster | HCCA: Cluster_60 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00021p00241290 | WTF1, AtWTF1,... | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
Als_g22428 | WTF1, AtWTF1 | plastidial RNA basal splicing factor *(WTF1) & original... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene21348.t1 | WTF1, AtWTF1,... | plastidial RNA basal splicing factor *(WTF1) & original... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.25G074200.1 | WTF1, AtWTF1,... | not classified & original description: pacid=50593386... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g01485 | WTF1, AtWTF1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g25601 | WTF1, AtWTF1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g30161 | WTF1, AtWTF1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os05g49610.1 | WTF1, AtWTF1,... | WTF1 plastidial RNA basal splicing factor | 0.03 | OrthoFinder output from all 47 species | |
Len_g11779 | WTF1, AtWTF1 | plastidial RNA basal splicing factor *(WTF1) & original... | 0.03 | OrthoFinder output from all 47 species | |
MA_158434g0010 | WTF1, AtWTF1 | WTF1 plastidial RNA basal splicing factor | 0.03 | OrthoFinder output from all 47 species | |
MA_423098g0010 | WTF1, AtWTF1 | WTF1 plastidial RNA basal splicing factor | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g04260 | WTF1, AtWTF1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g06540 | WTF1, AtWTF1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g35883 | No alias | plastidial RNA basal splicing factor *(WTF1) & original... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e026570_P001 | WTF1, AtWTF1,... | WTF1 plastidial RNA basal splicing factor | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000096 | sulfur amino acid metabolic process | IEP | HCCA |
BP | GO:0000097 | sulfur amino acid biosynthetic process | IEP | HCCA |
CC | GO:0005737 | cytoplasm | IEP | HCCA |
BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
BP | GO:0006534 | cysteine metabolic process | IEP | HCCA |
BP | GO:0006535 | cysteine biosynthetic process from serine | IEP | HCCA |
BP | GO:0006563 | L-serine metabolic process | IEP | HCCA |
BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
MF | GO:0008374 | O-acyltransferase activity | IEP | HCCA |
BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
MF | GO:0009001 | serine O-acetyltransferase activity | IEP | HCCA |
BP | GO:0009069 | serine family amino acid metabolic process | IEP | HCCA |
BP | GO:0009070 | serine family amino acid biosynthetic process | IEP | HCCA |
BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
BP | GO:0016226 | iron-sulfur cluster assembly | IEP | HCCA |
MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
MF | GO:0016412 | serine O-acyltransferase activity | IEP | HCCA |
MF | GO:0016413 | O-acetyltransferase activity | IEP | HCCA |
MF | GO:0016746 | acyltransferase activity | IEP | HCCA |
MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
BP | GO:0019344 | cysteine biosynthetic process | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | HCCA |
BP | GO:0044272 | sulfur compound biosynthetic process | IEP | HCCA |
BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
MF | GO:0051540 | metal cluster binding | IEP | HCCA |
BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR021099 | PORR_domain | 76 | 406 |
No external refs found! |