Lfl_g04879

Description : mTERF-type transcription factor & original description: none

Gene families : OG0003109 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003109_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g04879
Cluster	HCCA: Cluster_39

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00234800	evm_27.TU.AmTr_v1...	RNA processing.organelle machineries.RNA...	0.02	OrthoFinder output from all 47 species
Adi_g025507	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g10946	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g13349	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.18G035200.1	Ceric.18G035200	mTERF-type transcription factor & original description:...	0.07	OrthoFinder output from all 47 species
Dcu_g40985	No alias	mTERF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01015207001	No alias	RNA biosynthesis.organelle...	0.02	OrthoFinder output from all 47 species
LOC_Os12g01980.1	LOC_Os12g01980	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_138082g0010	No alias	transcription factor (mTERF). mTERF mitochondrial RNA...	0.03	OrthoFinder output from all 47 species
MA_39589g0010	No alias	transcription factor (mTERF). mTERF4 plastidial RNA...	0.02	OrthoFinder output from all 47 species
Pir_g15337	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g05386	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g07653	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e023745_P001	Zm00001e023745	transcription factor (mTERF). mTERF mitochondrial RNA...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005730	nucleolus	IEP	HCCA
BP	GO:0006099	tricarboxylic acid cycle	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
MF	GO:0008134	transcription factor binding	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	HCCA
BP	GO:0042254	ribosome biogenesis	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
MF	GO:0046912	acyltransferase activity, acyl groups converted into alkyl on transfer	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003690	MTERF	367	675

External Links

No external refs found!

Lfl_g04879

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation