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  5. Lfl_g04807

Lfl_g04807


Description : component *(MED26) of MEDIATOR transcription co-activator complex & original description: none


Gene families : OG0000390 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000390_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g04807

Target Alias Description ECC score Gene Family Method Actions
AT5G05140 No alias Transcription elongation factor (TFIIS) family protein 0.03 OrthoFinder output from all 47 species
Adi_g078815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06922 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g20783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G055300.1 Ceric.15G055300 component *(MED26) of MEDIATOR transcription... 0.05 OrthoFinder output from all 47 species
Ceric.29G056100.1 Ceric.29G056100 component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Dcu_g19305 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Len_g01212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g07806 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29561 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Zm00001e010865_P001 Zm00001e010865 component MED26 of MEDIATOR transcription co-activator complex 0.03 OrthoFinder output from all 47 species
Zm00001e039442_P001 Zm00001e039442 Probable mediator of RNA polymerase II transcription... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004652 polynucleotide adenylyltransferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
MF GO:0016157 sucrose synthase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR017923 TFIIS_N 158 206
No external refs found!