1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g04687

Lfl_g04687 (RD21, RD21A)


Aliases : RD21, RD21A

Description : EC_3.4 hydrolase acting on peptide bond (peptidase) & original description: none


Gene families : OG0000056 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g04687

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0001.g000770 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Ehy_g31530 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Nbi_g04349 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0247.g026709 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Smo139792 No alias Caricain OS=Carica papaya 0.02 OrthoFinder output from all 47 species
Spa_g42208 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Spa_g53926 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR000668 Peptidase_C1A_C 137 355
IPR013201 Prot_inhib_I29 43 100
IPR000118 Granulin 389 436
No external refs found!