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  5. Lfl_g04685

Lfl_g04685


Description : ubiquitin-dependent protease *(DA1) & original description: none


Gene families : OG0000918 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000918_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g04685

Target Alias Description ECC score Gene Family Method Actions
AT1G19270 DA1 DA1 0.02 OrthoFinder output from all 47 species
AT5G66630 DAR5 DA1-related protein 5 0.03 OrthoFinder output from all 47 species
Aspi01Gene38305.t1 Aspi01Gene38305 ubiquitin-dependent protease *(DA1) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.38G045100.1 Ceric.38G045100 ubiquitin-dependent protease *(DA1) & original... 0.03 OrthoFinder output from all 47 species
Cre10.g424350 No alias Protein DA1-related 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dcu_g39235 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os06g08400.1 LOC_Os06g08400 ubiquitin receptor regulatory protein (DA1) 0.02 OrthoFinder output from all 47 species
MA_68215g0010 DAR2 Protein DA1-related 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ore_g19030 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57297 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003135_P001 Zm00001e003135 ubiquitin receptor regulatory protein (DA1) 0.03 OrthoFinder output from all 47 species
Zm00001e005086_P004 Zm00001e005086 ubiquitin receptor regulatory protein (DA1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR022087 DA1-like_dom 259 462
IPR001781 Znf_LIM 110 164
No external refs found!