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  5. Lfl_g04457

Lfl_g04457


Description : small subunit of ribulose-1,5-bisphosphat carboxylase/oxygenase heterodimer & original description: none


Gene families : OG0007954 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007954_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g04457

Target Alias Description ECC score Gene Family Method Actions
Als_g18360 No alias small subunit of ribulose-1,5-bisphosphat... 0.14 OrthoFinder output from all 47 species
Aop_g62345 No alias small subunit of ribulose-1,5-bisphosphat... 0.1 OrthoFinder output from all 47 species
Aop_g68148 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68783 No alias small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Aop_g68784 No alias small subunit of ribulose-1,5-bisphosphat... 0.06 OrthoFinder output from all 47 species
Cba_g36893 No alias small subunit of ribulose-1,5-bisphosphat... 0.12 OrthoFinder output from all 47 species
Dac_g15046 No alias small subunit of ribulose-1,5-bisphosphat... 0.09 OrthoFinder output from all 47 species
Dac_g35392 No alias small subunit of ribulose-1,5-bisphosphat... 0.14 OrthoFinder output from all 47 species
Dcu_g06004 No alias small subunit of ribulose-1,5-bisphosphat... 0.12 OrthoFinder output from all 47 species
Dde_g09063 No alias small subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Dde_g23301 No alias small subunit of ribulose-1,5-bisphosphat... 0.11 OrthoFinder output from all 47 species
Dde_g46381 No alias small subunit of ribulose-1,5-bisphosphat... 0.06 OrthoFinder output from all 47 species
Len_g38133 No alias small subunit of ribulose-1,5-bisphosphat... 0.04 OrthoFinder output from all 47 species
Msp_g11427 No alias small subunit of ribulose-1,5-bisphosphat... 0.08 OrthoFinder output from all 47 species
Msp_g17648 No alias small subunit of ribulose-1,5-bisphosphat... 0.08 OrthoFinder output from all 47 species
Msp_g25590 No alias small subunit of ribulose-1,5-bisphosphat... 0.08 OrthoFinder output from all 47 species
Tin_g06955 No alias small subunit of ribulose-1,5-bisphosphat... 0.08 OrthoFinder output from all 47 species
Tin_g06956 No alias small subunit of ribulose-1,5-bisphosphat... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016849 phosphorus-oxygen lyase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!