Aliases : UBQ6
Description : component *(eS31) of small ribosomal-subunit (SSU) proteome & original description: none
Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00017p00094950 | UBQ6,... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
AT2G36170 | No alias | Ubiquitin supergroup;Ribosomal protein L40e | 0.04 | OrthoFinder output from all 47 species | |
AT2G47110 | UBQ6 | ubiquitin 6 | 0.04 | OrthoFinder output from all 47 species | |
AT3G52590 | UBQ1, EMB2167,... | ubiquitin extension protein 1 | 0.05 | OrthoFinder output from all 47 species | |
Cba_g37486 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Cre06.g273600 | UBQ6 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g26728 | UBQ11 | UBQ ubiquitin-fold protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g38726 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01038617001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os01g22490.1 | UBQ6, LOC_Os01g22490 | component RPS27a of SSU proteome | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os06g44080.1 | RUB1, ATRUB1,... | ubiquitin-fold protein (RUB) | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os09g39500.1 | LOC_Os09g39500 | component RPL40 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g10245 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g15041 | UBQ6 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
MA_13101g0020 | No alias | component RPL40 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
MA_9129425g0010 | No alias | component RPL40 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
Mp7g12760.1 | UBQ6 | component RPS27a of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
Mp8g00780.1 | No alias | component RPL40 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
Pp3c10_25270V3.1 | Pp3c10_25270 | ubiquitin extension protein 1 | 0.03 | OrthoFinder output from all 47 species | |
Pp3c12_5640V3.1 | UBQ6, Pp3c12_5640 | ubiquitin 6 | 0.02 | OrthoFinder output from all 47 species | |
Pp3c12_5760V3.1 | UBQ6, Pp3c12_5760 | ubiquitin 6 | 0.02 | OrthoFinder output from all 47 species | |
Pp3c20_23170V3.1 | Pp3c20_23170 | ubiquitin extension protein 1 | 0.02 | OrthoFinder output from all 47 species | |
Pp3c24_430V3.1 | Pp3c24_430 | ubiquitin extension protein 1 | 0.02 | OrthoFinder output from all 47 species | |
Pp3c4_19000V3.1 | UBQ6, Pp3c4_19000 | ubiquitin 6 | 0.02 | OrthoFinder output from all 47 species | |
Pp3c8_14230V3.1 | UBQ6, Pp3c8_14230 | ubiquitin 6 | 0.02 | OrthoFinder output from all 47 species | |
Sam_g07364 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Smo93613 | RUB1, ATRUB1, NEDD8 | Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g068045.1.1 | UBQ6, Solyc01g068045 | component RPS27a of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
Solyc03g082570.4.1 | Solyc03g082570 | component RPL40 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
Solyc08g008590.4.1 | Solyc08g008590 | component RPL40 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
Solyc12g098940.2.1 | UBQ6, Solyc12g098940 | component RPS27a of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e000962_P001 | Zm00001e000962 | component RPL40 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e000965_P001 | Zm00001e000965 | component RPL40 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e009474_P001 | Zm00001e009474 | component RPL40 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e026237_P001 | UBQ6, Zm00001e026237 | component RPS27a of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e028916_P001 | UBQ6, Zm00001e028916 | component RPS27a of SSU proteome | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005789 | endoplasmic reticulum membrane | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
MF | GO:0019843 | rRNA binding | IEP | HCCA |
CC | GO:0031090 | organelle membrane | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
MF | GO:0044183 | protein folding chaperone | IEP | HCCA |
BP | GO:0045048 | protein insertion into ER membrane | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
BP | GO:0051205 | protein insertion into membrane | IEP | HCCA |
MF | GO:0051287 | NAD binding | IEP | HCCA |
BP | GO:0051668 | localization within membrane | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0072657 | protein localization to membrane | IEP | HCCA |
BP | GO:0090150 | establishment of protein localization to membrane | IEP | HCCA |
No external refs found! |