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  5. Lfl_g04159

Lfl_g04159


Description : solute transporter *(AAAP) & original description: none


Gene families : OG0000562 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000562_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g04159

Target Alias Description ECC score Gene Family Method Actions
LOC_Os06g16420.1 LOC_Os06g16420 solute transporter (AAAP) 0.03 OrthoFinder output from all 47 species
Nbi_g01209 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e023437_P001 Zm00001e023437 solute transporter (AAAP) 0.02 OrthoFinder output from all 47 species
Zm00001e028835_P001 Zm00001e028835 solute transporter (AAAP) 0.03 OrthoFinder output from all 47 species
Zm00001e036819_P002 Zm00001e036819 solute transporter (AAAP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0042162 telomeric DNA binding IEP HCCA
MF GO:0043047 single-stranded telomeric DNA binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0098847 sequence-specific single stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 43 439
No external refs found!