Lfl_g04104 (ATGCN4, GCN4)

Aliases : ATGCN4, GCN4

Description : )regulatory protein *(GCN4) of RIN4 activity & original description: none

Gene families : OG0004763 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004763_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g04104

Target	Alias	Description	ECC score	Gene Family Method
Aop_g04319	ATGCN4, GCN4	)regulatory protein *(GCN4) of RIN4 activity & original...	0.02	OrthoFinder output from all 47 species
Cba_g48987	ATGCN4, GCN4	)regulatory protein *(GCN4) of RIN4 activity & original...	0.02	OrthoFinder output from all 47 species
Dcu_g04018	ATGCN4, GCN4	)regulatory protein *(GCN4) of RIN4 activity & original...	0.02	OrthoFinder output from all 47 species
Sam_g11947	No alias	)regulatory protein *(GCN4) of RIN4 activity & original...	0.02	OrthoFinder output from all 47 species
Sam_g11948	No alias	)regulatory protein *(GCN4) of RIN4 activity & original...	0.02	OrthoFinder output from all 47 species
Spa_g06994	ATGCN4, GCN4	)regulatory protein *(GCN4) of RIN4 activity & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005789	endoplasmic reticulum membrane	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
MF	GO:0033926	glycopeptide alpha-N-acetylgalactosaminidase activity	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
MF	GO:0140103	catalytic activity, acting on a glycoprotein	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	172	346
IPR003439	ABC_transporter-like_ATP-bd	512	647

External Links

No external refs found!